exomePeak2

https://github.com/zw-xjtlu/exomepeak2

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exomePeak2 provides peak detection and differential methylation for Methylated RNA...

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### Install exomePeak2 via R

Source: https://github.com/zw-xjtlu/exomepeak2/blob/master/README.md

Installs required Bioconductor dependencies and the exomePeak2 package from GitHub using devtools.

```r
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install(c("Rsamtools", "GenomicAlignments", "GenomicRanges", 
                       "GenomicFeatures", "DESeq2", "ggplot2", "mclust", "BSgenome", 
                       "Biostrings", "GenomeInfoDb", "BiocParallel", "IRanges", 
                       "S4Vectors", "rtracklayer", "methods", "stats", 
                       "utils", "BiocGenerics", "magrittr", "speedglm", "splines"))

if (!requireNamespace("devtools", quietly = TRUE))
    install.packages("devtools")

devtools::install_github("ZW-xjtlu/exomePeak2", build_vignettes = TRUE)
```

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### Access exomePeak2 Documentation

Source: https://github.com/zw-xjtlu/exomepeak2/blob/master/README.md

Command to open the package vignettes after successful installation.

```r
browseVignettes("exomePeak2")
```

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