Noodles

https://github.com/zaeleus/noodles

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Bioinformatics I/O libraries in Rust

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License:MIT

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### Run `noodles` Examples (Bash)

Source: https://github.com/zaeleus/noodles/blob/master/README.md

These Bash commands illustrate how to execute example applications provided with the `noodles` library. The first command runs a BAM write example, redirecting its output to a `sample.bam` file. The second command runs a BAM header reading example, taking `sample.bam` as input. Examples are run in release mode for performance.

```Bash
cargo run --release --example bam_write > sample.bam
cargo run --release --example bam_read_header sample.bam
```

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### Import `noodles::bam` Module (Rust)

Source: https://github.com/zaeleus/noodles/blob/master/README.md

After adding the `noodles` crate with the `bam` feature enabled, this Rust `use` statement imports the `bam` module. This makes the types and functions related to BAM file handling available for use in the current Rust file.

```Rust
use noodles::bam;
```

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### Add `noodles` Crate with Features (Rust/Cargo)

Source: https://github.com/zaeleus/noodles/blob/master/README.md

This command demonstrates how to add the `noodles` meta-crate to a Rust project's dependencies using `cargo add`. It specifically enables the `bam` feature, allowing access to BAM file format functionalities within the project. Other format-specific features can be enabled similarly.

```Shell
cargo add noodles --features bam
```

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