VCF-kit

https://vcf-kit.readthedocs.io/en/latest/

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VCF-kit is a collection of command-line tools useful for performing a variety of analyses and...

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### Install VCF-kit dependencies

Source: https://vcf-kit.readthedocs.io/en/latest

Run the vk setup command to install required bioinformatics programs like bwa, samtools, bcftools, blast, and muscle using homebrew or linux-brew.

```bash
vk setup
```

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### Install VCF-kit via pip

Source: https://vcf-kit.readthedocs.io/en/latest

Install the VCF-kit package using pip. Note that numpy may need to be installed independently.

```bash
pip install numpy # You may need to install numpy independently.
pip install VCF-kit
```

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