scVelo

https://scvelo.readthedocs.io/en/latest/

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A scalable toolkit for RNA velocity analysis in single cells using dynamical modeling and...

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### RNA velocity inference through metabolic labeling information citation

Source: https://scvelo.readthedocs.io

Citation for the method estimating RNA velocity from metabolic labeling information.

```bibtex
@article{Weiler2024,
    author = {Weiler, Philipp and Lange, Marius and Klein, Michal and Pe'er, Dana and Theis, Fabian},
    publisher = {Springer Science and Business Media LLC},
    url = {http://dx.doi.org/10.1038/s41592-024-02303-9},
    doi = {10.1038/s41592-024-02303-9},
    issn = {1548-7105},
    journal = {Nature Methods},
    month = jun,
    number = {7},
    pages = {1196-1205},
    title = {CellRank 2: unified fate mapping in multiview single-cell data},
    volume = {21},
    year = {2024},
}

```

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### EM and steady-state model citation

Source: https://scvelo.readthedocs.io

Citation for the EM (dynamical) or steady-state model in scVelo.

```bibtex
@article{Bergen2020,
    title = {Generalizing RNA velocity to transient cell states through dynamical modeling},
    volume = {38},
    ISSN = {1546-1696},
    url = {http://dx.doi.org/10.1038/s41587-020-0591-3},
    DOI = {10.1038/s41587-020-0591-3},
    number = {12},
    journal = {Nature Biotechnology},
    publisher = {Springer Science and Business Media LLC},
    author = {Bergen, Volker and Lange, Marius and Peidli, Stefan and Wolf, F. Alexander and Theis, Fabian J.},
    year = {2020},
    month = aug,
    pages = {1408-1414}
}

```

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