### GET /variation/view/ Source: https://www.ncbi.nlm.nih.gov/variation/view/help Constructs a customized view of the Variation Viewer using query parameters. ```APIDOC ## GET /variation/view/ ### Description Links to the Variation Viewer with customized display settings based on provided query parameters. ### Method GET ### Endpoint http://www.ncbi.nlm.nih.gov/variation/view/ ### Parameters #### Query Parameters - **assm** (string) - Optional - Specifies the genome assembly (e.g., GCF_000001405.28 for GRCh38.p2). - **chr** (string) - Optional - Specifies the chromosome name or top-level accession (e.g., 'chr=1', 'chr=MT'). - **from** (integer) - Optional - Start position of the genomic range (1-based). - **to** (integer) - Optional - End position of the genomic range (1-based). - **q** (string) - Optional - Search term (gene symbol, RS ID, dbVar ID, gene ID, or cytogenetic band). - **filters** (string) - Optional - Filter selections for the Variant Table (e.g., 'source:dbsnp', 'inclinvar:1'). - **mk** (string) - Optional - Markers to highlight regions of interest, formatted as 'position|label' or 'start:end|label'. ### Request Example http://www.ncbi.nlm.nih.gov/variation/view/?q=APOE&filters=source:dbsnp+inclinvar:1#data ``` -------------------------------- ### VCF Record with CLNALLE Mapping Source: https://www.ncbi.nlm.nih.gov/variation/docs/faq Example of a VCF record where the CLNALLE tag maps clinical data to multiple alternate alleles. ```text 15 48796042 rs140603 G A,C . . RSPOS=48796042;RV;GMAF=0.0027;dbSNPBuildID=78;SSR=0;SAO=1;VP=050368000b05050517100100; GENEINFO=FBN1:2200;WGT=1;VC=SNV;PM;PMC;S3D;SLO;NSM;REF;SYN;ASP;VLD;G5;HD;GNO;KGPhase1; KGPROD;OTHERKG;PH3;LSD;CLNALLE=1,2; CLNHGVS=NC_000015.9:g.48796042G>A,NC_000015.9:g.48796042G>C;CLNSRC=Correlagen,Correlagen; CLNORIGIN=1,1;CLNSIG=2,4;CLNDBN=Marfan Syndrome, Marfan Syndrome ```