ChromHMM

https://ernstlab.github.io/ChromHMM/

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ChromHMM is a computational tool for discovering and characterizing chromatin states using Hidden...

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### Learn Chromatin States Model

Source: https://ernstlab.github.io/ChromHMM

This command learns a chromatin state model using the LearnModel command. Specify the input data, output directory, number of states, and genome assembly.

```bash
java -mx1600M -jar ChromHMM.jar LearnModel SAMPLEDATA_HG18 OUTPUTSAMPLE 10 hg18
```

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