### Install pfamAnalyzeR Dependency

Source: https://github.com/kvittingseerup/isoformswitchanalyzer/blob/master/README.md

Installs the pfamAnalyzeR package using devtools if it's not already installed. This is a prerequisite for IsoformSwitchAnalyzeR.

```r
if (!requireNamespace("devtools", quietly = TRUE)){
    install.packages("devtools")
}
if (!requireNamespace("pfamAnalyzeR", quietly = TRUE)){
    devtools::install_github("kvittingseerup/pfamAnalyzeR")
}
```

--------------------------------

### Install IsoformSwitchAnalyzeR from GitHub

Source: https://github.com/kvittingseerup/isoformswitchanalyzer/blob/master/README.md

Installs the latest version of IsoformSwitchAnalyzeR directly from GitHub using devtools. Includes an option to build vignettes.

```r
if (!requireNamespace("devtools", quietly = TRUE)){
    install.packages("devtools")
}
devtools::install_github("kvittingseerup/IsoformSwitchAnalyzeR", build_vignettes = TRUE)
```

--------------------------------

### Install IsoformSwitchAnalyzeR from Bioconductor

Source: https://github.com/kvittingseerup/isoformswitchanalyzer/blob/master/README.md

Installs the IsoformSwitchAnalyzeR package from Bioconductor. Ensures BiocManager is installed and sets the Bioconductor version to 'devel'.

```r
if (!requireNamespace("BiocManager", quietly = TRUE)){
    install.packages("BiocManager")
}
BiocManager::install(version='devel')
BiocManager::install("IsoformSwitchAnalyzeR")
```

--------------------------------

### Access IsoformSwitchAnalyzeR Vignette

Source: https://github.com/kvittingseerup/isoformswitchanalyzer/blob/master/README.md

Opens the vignette for IsoformSwitchAnalyzeR in the R environment, providing detailed usage instructions and examples.

```r
browseVignettes("IsoformSwitchAnalyzeR")
```

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