### Install phangorn from GitHub

Source: https://github.com/klausvigo/phangorn/blob/main/README.md

Install the development version of the phangorn package from GitHub.

```R
remotes::install_github("KlausVigo/phangorn")
```

--------------------------------

### Install phangorn from CRAN

Source: https://github.com/klausvigo/phangorn/blob/main/README.md

Install the latest release of the phangorn package from CRAN.

```R
install.packages("phangorn")
```

--------------------------------

### Install optional packages rgl and ggseqlogo

Source: https://github.com/klausvigo/phangorn/blob/main/README.md

Install the rgl and ggseqlogo packages, which provide additional functionality for phangorn.

```R
install.packages("rgl")
install.packages("ggseqlogo")
```

--------------------------------

### Install phangorn from r-universe

Source: https://github.com/klausvigo/phangorn/blob/main/README.md

Install the development version of the phangorn package from r-universe.

```R
install.packages('phangorn', repos = c('https://klausvigo.r-universe.dev', 'https://repo.r-wasm.org'))
```

--------------------------------

### Install Biostrings from Bioconductor

Source: https://github.com/klausvigo/phangorn/blob/main/README.md

Install the Biostrings package from Bioconductor, a prerequisite for the development version of phangorn.

```R
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("Biostrings")
```

--------------------------------

### DNA Sequence Data

Source: https://github.com/klausvigo/phangorn/blob/main/inst/extdata/trees/seqfile.txt

Raw DNA sequence data extracted from a file.

```text
ATGGGTGCGAGTGGATCCAAGAAGCGTTCCAGGCCTTCGCAAGGGCTGCAACAGAGACTCTTACGAGCGCGTGCAGGAACTTGTGGGGAATATTGGAACGAATTGGGAGGGGAATACTCGCAGTCCCAAGAAGGATCAGGCAGGGAGCAGAGATCGCCCTCCTGTGAGGGACAGCGGTATCGGCAGGGAGACTTCATGAATACCCCGTGGAGAGACCCAGCAGCAGAAGGGGAGAAAAATTCGTATAGGCAACAAAATATGGATGATGTAGATTCAGATGATGATGACCTAGTAGGGGTCCCTGTCACACCAAGAACACAACTAAGAGAAATGACATATAGATTGGCAATAGATATGTCACATTTTATAAAAGATAAGGGGGGACTGGAAGGGATGTTTTACAGTGAAAGAAGGCATAGAATCTTAGATATATACTTAGAAAAGGAAGAGGGGATAATTCCAGATTGGCAGAACTATACTCATGGGCCAGGAATAAGATACCCAATGTTCTTTGGGTGGCTATGGAAGCTGGTACCAGTAGATGTCCCACAAGACACTGAGACTCACTGCTTAATGCACCCAGCACAAACGAGCAAGTTTGATGACCTGCATGGGGAAACACTAGTCTGGGAGTTTGACCCCATGCTGGCCTTTGACTACGAGGCTTTTACTCGATACCCAGAGGAGTTTAAGCACAAGTCAGGCCTACCAGAAGATGAGTGGAAGGCGAGACTGAAAGCAAGAGGAATACCATTT
```

```text
AJ344406
```

--------------------------------

### DNA Sequence Data

Source: https://github.com/klausvigo/phangorn/blob/main/inst/extdata/trees/seqfile.txt

Raw DNA sequence data extracted from a file.

```text
ATGGGTGCGAGTGGATCCAAGAAGCGTTCCAAGCCTTCGCGAGGGCTGCAAGAGAGACTCTTACGAGCGCGTGCAGGAGCTTGTGGGGGACATTGGGACGAATTGGGAGGGAAATACTCGCAGTCCCAAGAAAGATCAGGCAGGGAGCAGAAATCGCCCTCCTGTGAGGGACAGCGGTATCAACAAGGGGACTTCATGAATACCCCATGGAGACACCCAGCAGCAGAAGGGGAGAAAAATTCATACAGGCAACAAAATATGGATGATGTAGATTCAGATGATGATGACCTAGTAGGAGTCTCTGTCACACCAAAAACACCACTAAGAGAAATGACATATAGATTGGCAGTAGATATGTCACATTTTATAAAAGATAAGGGGGGACTGGAAGGGATGTTTTACAGTGAAAGAAGACATAGAATCCTGGATATATACTTAGAAAAGGAAGAAGGAATAATTGCAGACTGGCAGAACTATACTCATGGGCCAGGAGTAAGATACCCCAAGTTCTTTGGGTGGCTATGGAAACTAGTACCAGTAGATGTCCCACAAGACACTGAGACTCACTGCTTGGTGCACCCAGCGCAAATAAGCAAGTTTGATGACCAGCATGGGGAAACACTAGTATGGAGATTTGACCCCATGCTAGCCTTCGATTACGTAGCCTTTAGACTATACCCAGAGGAATTTGGGCACAAGTCAGGTCTACCAGAAGATGAATGGAAGGCGAGACTGAAAGCAAGGGGAATACCATTT
```

```text
AJ344393
```

--------------------------------

### DNA Sequence Data

Source: https://github.com/klausvigo/phangorn/blob/main/inst/extdata/trees/seqfile.txt

Raw DNA sequence data extracted from a file.

```text
ATGGGTGCGAGTGGATCCAAGAAGCCTTCCAGGCCTTCGCGAGGGCTACAAGAGAGACTCTTGCGAGCGCGTGCAGGGACTTGTGGGGGTTATTGGCAAGAATTGGGAGGGGAATACTCGCGGTCCCAAGAAGAATCAGGCAGGGAGCAGAGATCGCCCTCCTGTGAGGGACAGCGGTATCAGCAGGGAGACTTTATGAATACTCCATGGAAAGACCCATCAGCAGTAAGGAAAGAAAATTCATACAGGCAACAAAATATGGATGATGTAGATTCAGATGATGATGACCTAGTAGGGGTTTCTGTCACACCACGAGTACCACTAAGAGAAATGACATATAGACGGGCAGTAGACATGTCACATTTAATAAAAGATAAGGGGGGACTGGAAGGGATGTTTTACAGTGAAAGAAGACATAGAATCTTAGATATATACCTGCAAAATGAAGAGGGGATAATTCCAGATTGGCAGAACTATACTCATGGGCCAGGAATAAGATACCCTAAGTTCTTTGGGTGGCTATGGAAGCTGGTACCAGTAGATGTCTCACAAGACACTGAGACTCACTGCTTAATGCACCCAGCACAAACAAGTCAGTTTGATGACATACATGGGGAGACTCTAGTTTGGAGGTTTGACCCCATGCTGGCCTATAGTTACACAGCTTTTATCAAACACCCAGAGGAATTTGGGCACAAGTCAGGCCTACCAGAAGAAGAGTGGAAGGCGAGACTGAAAGCAAGAGGAATACCATTT
```

```text
AJ344408
```

--------------------------------

### DNA Sequence Data

Source: https://github.com/klausvigo/phangorn/blob/main/inst/extdata/trees/seqfile.txt

Raw DNA sequence data extracted from a file.

```text
ATGGGTGCGAGTGGATCCAAGAAGCGTTCCAGGCCTTCGCAAGGGCTGCAACAGAGACTCTTACGAGCGCGTGCAGGGGCCTGTGGGGGATATTGGAACGAATTGGGAGGGGAATACTCGCAGTCCCAAGAAGGATCAGGCAGGGAGCAGAAATCGCCCTCCTGTGAGGGACAGCAGTATCAACAAGGGGACTTCATGAATACTCCATGGAGAACCCCAGCAGCAGAAGGGGAGAAAAAAGCGTACAGGCAACAAAATATGGATGATGTAGATTCAGATGATGAGGACCAAGTAGGAGTTTCTGTCACACCAAGAGTGCAACTAAGAGGAATGACATATAAATTGGCAATAGATATGTCACATTTTATAAAAGAAAAAGGGGGACTGGAAGGGATGTTTTACAGTGACAGGAGACATAAAATCCTAGATATATACTTAGAAAAGGAAGAGGGGGTGATTCCAGATTGGCAGAACTATACTCATGGGCCAGGAATAAGATACCCAAAGTTCTATGGATGGCTATGGAAGCTAGTACCAGTAGATATCCCACAAGGCACTGAGACTCACTGCTTAATGCATCCAGCACAAACAAGCCACTTTGATGACCCACATGGGGAAACACTAGTTTGGAGGTTTGACCCCAAGCTGGCCCATGATTATGTAGCCTTTAATCTATTCCCAGAAGAATTTGGATACCAGTCAGGCCTACCAGAAAAAGAATGGAAGGCAAAACTGAAAGCAAGAGGAATACCGTTT
```

```text
AJ344404
```

--------------------------------

### DNA Sequence Data

Source: https://github.com/klausvigo/phangorn/blob/main/inst/extdata/trees/seqfile.txt

Raw DNA sequence data extracted from a file.

```text
ATGGGTGCGAGTGGATCCAAGACGCGTTCCAGGCCTTCGCGAGGGCTACAAGAGAGACTCTTGCGAGCGCGTGCTGGGGCTTGTGGGGGACATTGGGGAGAATTGGAAGGGGAATACTCGCAATTCCAAGGAGAATCAGGCAGGGAGCAGAAATCGCCCTCCTGTGAGGGACAGCGGTATCAAGCAGGGGACTTCATGAATACTCCATGGAGAACCCCAGCAACAGAGGGAGAGAAAAACCCATACAAGCAACAAAATATGGATGATGTAGATTCAGATGATGATGACCAAGTAGGAGTTCCTGTCTCACCAAGAGTACCACTAAGAGAAATGACATATAGATTGGCAATAGATATGTCACATTTTATAAAAGAAAAGGGGGGACTGGAAGGGATGTTTTACAGTGAGAGAAGACATAGAATCTTAGATTTGTATTTAGAAAAAGAAGAAGGGATAGTTCCAGATTGGCAAAACTATGCTCATGGGCCGGGAACAAGATACCCCAGGTTCTTTGGGTGGTTATGGAAGCTAGTACCAGTAGATATCACACAAGACACTGACACTCACTGCTTAGTACACCCAGCACAAACAAGTAAGTTTGATGACCCACATGGGGAAACACTGGTTTGGAGGTTTGACCCCATGCTGGCCTATAACTATGAAGCCTTTAATCGATACCCAGAGGAATTTGGGTACAAGTCAGGCCTACCGGAGGAAGAGTGGAAGGCGAGACTGAAAGCAAGGGGAATACCCTTT
```

```text
AJ344388
```

--------------------------------

### DNA Sequence Data

Source: https://github.com/klausvigo/phangorn/blob/main/inst/extdata/trees/seqfile.txt

Raw DNA sequence data extracted from a file.

```text
ATGGGTGCGAGTGGATCCAAGAAGCAATCCAAGCCTTCGCGAGGGTTACGAGAGAGACTCTTACGAGCGCGTGGAGAGACTTCTGGGGAGGGTTGGCGAGAATTGGGAGGGGAATACTTGCAGTCCCAAGAAGAATCAGGCAGGGAGCAGAGATCGCGCTCCTGTGAGGGAAGGCGGTATCAGCAGGGAGAATTTATGAATACTCCATGGAAAGACCCAGCACCAGAAGGGAAAGAGAATGCATATAGACAACAAAATATGGATGATGTAGATTCAGATGATGATGACCTAGTAGGGGTCCCTGTCACACCACGAGTACCACTAAGAGAAATGACATATAGACGAGCAATAGACATGTCACATTTTATAAAAGATAAGGGGGGACTGGAAGGGATGTTTTACAGTGAAAGAAGACATAAAATCTTAGATATATACCTACAAAATGAAGAGGGGATAATTCCAGATTGGCAGAACTATACTCATGGGCCAGGAATAAGATACCCAATGTTCTTTGGGTGGCTATGGAAGCTAGTACCAGTAGATGTCCCACAAGACATTGAGACTCACTGCCTAATGCACCCAGCACAAACAAGCAGGTTTGATGACCCACATGGGCAGACACTAGTTTGGAGGTTTGACCCCATGCTGGCCTATGATTATGTAGCCTTTACCCGATACCCAGAGGAATTTGGGCACAAGTCAGGCCTACCAGAAGAAGAGTGGAAGGCGAGACTGAAAGCAAGGGGAATACCATTT
```

```text
AJ344410
```

=== COMPLETE CONTENT === This response contains all available snippets from this library. No additional content exists. Do not make further requests.